IL_6NUO_163

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUAGUAC*GGACCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_163 not in the Motif Atlas

Homologous match to IL_7RQB_103

Geometric discrepancy: 0.1645

The information below is about IL_7RQB_103

Detailed Annotation

Sarcin-Ricin target in LSU H95; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_16458.1

Basepair signature

cWW-L-R-L-R-cSH-tWH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

6NUO|1|RA|C|2664
6NUO|1|RA|U|2665
6NUO|1|RA|A|2666
6NUO|1|RA|G|2667
6NUO|1|RA|U|2668
6NUO|1|RA|A|2669
6NUO|1|RA|C|2670
*
6NUO|1|RA|G|2675
6NUO|1|RA|G|2676
6NUO|1|RA|A|2677
6NUO|1|RA|C|2678
6NUO|1|RA|C|2679
6NUO|1|RA|G|2680

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RH

50S ribosomal protein L6