IL_6NUO_170

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_170 not in the Motif Atlas

Homologous match to IL_7RQB_110

Geometric discrepancy: 0.106

The information below is about IL_7RQB_110

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_83162.5

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

6NUO|1|RA|U|2857
6NUO|1|RA|G|2858
6NUO|1|RA|U|2859
6NUO|1|RA|A|2860
6NUO|1|RA|A|2861
6NUO|1|RA|G|2862
*
6NUO|1|RA|U|2875
6NUO|1|RA|U|2876
6NUO|1|RA|G|2877
6NUO|1|RA|A|2878
6NUO|1|RA|G|2879

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RR

50S ribosomal protein L17

Chain RT

50S ribosomal protein L19