IL_6NUO_247

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGAAU*AUAG

Length

9 nucleotides

Bulged bases

6NUO|1|YA|A|307

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_247 not in the Motif Atlas

Homologous match to IL_7RQB_011

Geometric discrepancy: 0.1043

The information below is about IL_7RQB_011

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

6NUO|1|YA|C|304
6NUO|1|YA|G|305
6NUO|1|YA|A|306
6NUO|1|YA|A|307
6NUO|1|YA|U|308
*
6NUO|1|YA|A|381
6NUO|1|YA|U|382
6NUO|1|YA|A|383
6NUO|1|YA|G|384

Current chains

Chain YA

23S rRNA

Nearby chains