IL_6NUO_248

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CAG*UGGG

Length

7 nucleotides

Bulged bases

6NUO|1|YA|G|376

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_248 not in the Motif Atlas

Homologous match to IL_7RQB_012

Geometric discrepancy: 0.1034

The information below is about IL_7RQB_012

Detailed Annotation

Isolated tHS basepair with bulges

Broad Annotation

No text annotation

Motif group

IL_38958.7

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

15

Unit IDs

6NUO|1|YA|C|312
6NUO|1|YA|A|313
6NUO|1|YA|G|314
*
6NUO|1|YA|U|374
6NUO|1|YA|G|375
6NUO|1|YA|G|376
6NUO|1|YA|G|377

Current chains

Chain YA

23S rRNA

Nearby chains