IL_6NUO_257

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_257 not in the Motif Atlas

Geometric match to IL_7RQB_021

Geometric discrepancy: 0.0802

The information below is about IL_7RQB_021

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

6NUO|1|YA|U|750
6NUO|1|YA|G|751
6NUO|1|YA|A|752
6NUO|1|YA|A|753
6NUO|1|YA|G|754
*
6NUO|1|YA|U|771
6NUO|1|YA|G|772
6NUO|1|YA|G|773
6NUO|1|YA|A|774
6NUO|1|YA|G|775

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YD

50S ribosomal protein L2