IL_6NUO_260

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GCC*GAGU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_260 not in the Motif Atlas

Geometric match to IL_4N0T_004

Geometric discrepancy: 0.3436

The information below is about IL_4N0T_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99358.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

6NUO|1|YA|G|883
6NUO|1|YA|C|884
6NUO|1|YA|C|885
*
6NUO|1|YA|G|985
6NUO|1|YA|A|986
6NUO|1|YA|G|987
6NUO|1|YA|U|988

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y8

50S ribosomal protein L35

Chain YP

50S ribosomal protein L15