3D structure

PDB id
6NUO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
CGAUG*CUAAG
Length
10 nucleotides
Bulged bases
6NUO|1|YA|U|1466
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6NUO_290 not in the Motif Atlas
Homologous match to IL_7RQB_055
Geometric discrepancy: 0.0943
The information below is about IL_7RQB_055
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_89002.2
Basepair signature
cWW-tWH-L-tHS-cWW
Number of instances in this motif group
20

Unit IDs

6NUO|1|YA|C|1463
6NUO|1|YA|G|1464
6NUO|1|YA|A|1465
6NUO|1|YA|U|1466
6NUO|1|YA|G|1467
*
6NUO|1|YA|C|1624
6NUO|1|YA|U|1625
6NUO|1|YA|A|1626
6NUO|1|YA|A|1627
6NUO|1|YA|G|1628

Current chains

Chain YA
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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