IL_6NUO_296

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UG*CAACAAG

Length

9 nucleotides

Bulged bases

6NUO|1|YA|A|1556

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_296 not in the Motif Atlas

Homologous match to IL_7RQB_061

Geometric discrepancy: 0.5475

The information below is about IL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52493.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

6NUO|1|YA|U|1528
6NUO|1|YA|G|1529
*
6NUO|1|YA|C|1552
6NUO|1|YA|A|1553
6NUO|1|YA|A|1554
6NUO|1|YA|C|1555
6NUO|1|YA|A|1556
6NUO|1|YA|A|1557
6NUO|1|YA|G|1558

Current chains

Chain YA

23S rRNA

Nearby chains