3D structure

PDB id
6NUO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
ACUCUG*CUGU
Length
10 nucleotides
Bulged bases
6NUO|1|YA|G|2014
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6NUO_302 not in the Motif Atlas
Geometric match to IL_7RQB_067
Geometric discrepancy: 0.1034
The information below is about IL_7RQB_067
Detailed Annotation
Intercalated tWH
Broad Annotation
Intercalated tWH
Motif group
IL_76273.1
Basepair signature
cWW-L-R-cWW
Number of instances in this motif group
14

Unit IDs

6NUO|1|YA|A|1716
6NUO|1|YA|C|1717
6NUO|1|YA|U|1718
6NUO|1|YA|C|1719
6NUO|1|YA|U|1720
6NUO|1|YA|G|1721
*
6NUO|1|YA|C|2012
6NUO|1|YA|U|2013
6NUO|1|YA|G|2014
6NUO|1|YA|U|2015

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YE
50S ribosomal protein L3
Chain YO
50S ribosomal protein L14

Coloring options:


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