IL_6NWY_145

3D structure

PDB id

6NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUGUGAAC*GGGAG

Length

13 nucleotides

Bulged bases

6NWY|1|RA|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NWY_145 not in the Motif Atlas

Homologous match to IL_3U4M_004

Geometric discrepancy: 0.5025

The information below is about IL_3U4M_004

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

6NWY|1|RA|C|2129
6NWY|1|RA|U|2130
6NWY|1|RA|G|2131
6NWY|1|RA|U|2132
6NWY|1|RA|G|2133
6NWY|1|RA|A|2134
6NWY|1|RA|A|2135
6NWY|1|RA|C|2136
*
6NWY|1|RA|G|2155
6NWY|1|RA|G|2156
6NWY|1|RA|G|2157
6NWY|1|RA|A|2158
6NWY|1|RA|G|2159

Current chains

Chain RA

23S rRNA

Nearby chains