IL_6O3M_050

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O3M_050 not in the Motif Atlas

Geometric match to IL_4LFB_055

Geometric discrepancy: 0.1537

The information below is about IL_4LFB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

6O3M|1|QA|C|1303
6O3M|1|QA|G|1304
6O3M|1|QA|G|1305
6O3M|1|QA|A|1306
6O3M|1|QA|U|1307
6O3M|1|QA|U|1308
*
6O3M|1|QA|A|1329
6O3M|1|QA|U|1330
6O3M|1|QA|G|1331
6O3M|1|QA|A|1332
6O3M|1|QA|A|1333
6O3M|1|QA|G|1334

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QM

30S ribosomal protein S13

Chain QU

30S ribosomal protein Thx