IL_6O8W_126
3D structure
- PDB id
- 6O8W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.53 Å
Loop
- Sequence
- CAUUAG*CCACGAUG
- Length
- 14 nucleotides
- Bulged bases
- 6O8W|1|a|U|259, 6O8W|1|a|C|295
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O8W_126 not in the Motif Atlas
- Homologous match to IL_4LFB_011
- Geometric discrepancy: 0.1599
- The information below is about IL_4LFB_011
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_46174.4
- Basepair signature
- cWW-cSS-tSS-tSH-L-cWW-tHW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6O8W|1|a|C|257
6O8W|1|a|A|258
6O8W|1|a|U|259
6O8W|1|a|U|260
6O8W|1|a|A|261
6O8W|1|a|G|262
*
6O8W|1|a|C|292
6O8W|1|a|C|293
6O8W|1|a|A|294
6O8W|1|a|C|295
6O8W|1|a|G|296
6O8W|1|a|A|297
6O8W|1|a|U|298
6O8W|1|a|G|299
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain q
- 30S ribosomal protein S17
Coloring options: