IL_6O8W_176
3D structure
- PDB id
- 6O8W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.53 Å
Loop
- Sequence
- CCGAAG*CUAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O8W_176 not in the Motif Atlas
- Geometric match to IL_5J7L_063
- Geometric discrepancy: 0.1968
- The information below is about IL_5J7L_063
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_80231.1
- Basepair signature
- cWW-L-R-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
6O8W|1|a|C|1445
6O8W|1|a|C|1446
6O8W|1|a|G|1447
6O8W|1|a|A|1448
6O8W|1|a|A|1449
6O8W|1|a|G|1450
*
6O8W|1|a|C|1482
6O8W|1|a|U|1483
6O8W|1|a|A|1484
6O8W|1|a|A|1485
6O8W|1|a|G|1486
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain L
- 50S ribosomal protein L14
- Chain Q
- 50S ribosomal protein L19
Coloring options: