IL_6O8X_151
3D structure
- PDB id
- 6O8X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.68 Å
Loop
- Sequence
- GGAGUACG*UGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O8X_151 not in the Motif Atlas
- Homologous match to IL_4LFB_034
- Geometric discrepancy: 0.1159
- The information below is about IL_4LFB_034
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_84044.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
6O8X|1|a|G|903
6O8X|1|a|G|904
6O8X|1|a|A|905
6O8X|1|a|G|906
6O8X|1|a|U|907
6O8X|1|a|A|908
6O8X|1|a|C|909
6O8X|1|a|G|910
*
6O8X|1|a|U|921
6O8X|1|a|G|922
6O8X|1|a|A|923
6O8X|1|a|A|924
6O8X|1|a|A|925
6O8X|1|a|C|926
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
Coloring options: