IL_6O8Z_015
3D structure
- PDB id
- 6O8Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- GCAC*GAGUGAAAUAGAUC
- Length
- 18 nucleotides
- Bulged bases
- 6O8Z|1|A|U|543, 6O8Z|1|A|U|547
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O8Z_015 not in the Motif Atlas
- Homologous match to IL_4WF9_015
- Geometric discrepancy: 0.1324
- The information below is about IL_4WF9_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44923.1
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 9
Unit IDs
6O8Z|1|A|G|521
6O8Z|1|A|C|522
6O8Z|1|A|A|523
6O8Z|1|A|C|524
*
6O8Z|1|A|G|535
6O8Z|1|A|A|536
6O8Z|1|A|G|537
6O8Z|1|A|U|538
6O8Z|1|A|G|539
6O8Z|1|A|A|540
6O8Z|1|A|A|541
6O8Z|1|A|A|542
6O8Z|1|A|U|543
6O8Z|1|A|A|544
6O8Z|1|A|G|545
6O8Z|1|A|A|546
6O8Z|1|A|U|547
6O8Z|1|A|C|548
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain T
- 50S ribosomal protein L22
- Chain V
- 50S ribosomal protein L24
Coloring options: