IL_6O8Z_144
3D structure
- PDB id
- 6O8Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- UGAAAGCC*GAGGG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O8Z_144 not in the Motif Atlas
- Homologous match to IL_5J7L_030
- Geometric discrepancy: 0.3142
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6O8Z|1|a|U|620
6O8Z|1|a|G|621
6O8Z|1|a|A|622
6O8Z|1|a|A|623
6O8Z|1|a|A|624
6O8Z|1|a|G|625
6O8Z|1|a|C|626
6O8Z|1|a|C|627
*
6O8Z|1|a|G|643
6O8Z|1|a|A|644
6O8Z|1|a|G|645
6O8Z|1|a|G|646
6O8Z|1|a|G|647
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
- Chain p
- 30S ribosomal protein S16
Coloring options: