IL_6O90_056

3D structure

PDB id

6O90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CAAUG*CUAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O90_056 not in the Motif Atlas

Homologous match to IL_4WF9_054

Geometric discrepancy: 0.237

The information below is about IL_4WF9_054

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

6O90|1|A|C|1459
6O90|1|A|A|1460
6O90|1|A|A|1461
6O90|1|A|U|1462
6O90|1|A|G|1463
*
6O90|1|A|C|1623
6O90|1|A|U|1624
6O90|1|A|A|1625
6O90|1|A|G|1626

Current chains

Chain A

23S rRNA

Nearby chains