IL_6O90_107

3D structure

PDB id

6O90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

UU*AUUG

Length

6 nucleotides

Bulged bases

6O90|1|A|U|2726, 6O90|1|A|U|2727

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O90_107 not in the Motif Atlas

Homologous match to IL_4WF9_103

Geometric discrepancy: 0.1513

The information below is about IL_4WF9_103

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_44609.2

Basepair signature

cWW-cWW

Number of instances in this motif group

24

Unit IDs

6O90|1|A|U|2709
6O90|1|A|U|2710
*
6O90|1|A|A|2725
6O90|1|A|U|2726
6O90|1|A|U|2727
6O90|1|A|G|2728

Current chains

Chain A

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L17

Chain Q

50S ribosomal protein L19