IL_6O90_135

3D structure

PDB id

6O90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

6O90|1|a|A|587

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O90_135 not in the Motif Atlas

Homologous match to IL_6CZR_134

Geometric discrepancy: 0.1506

The information below is about IL_6CZR_134

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.5

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

6O90|1|a|C|584
6O90|1|a|G|585
6O90|1|a|U|586
6O90|1|a|A|587
6O90|1|a|A|588
6O90|1|a|A|589
6O90|1|a|G|590
*
6O90|1|a|C|896
6O90|1|a|G|897

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain q

30S ribosomal protein S17