IL_6O90_162

3D structure

PDB id

6O90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GUCG*CAAAUC

Length

10 nucleotides

Bulged bases

6O90|1|a|A|1295

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O90_162 not in the Motif Atlas

Homologous match to IL_4LFB_052

Geometric discrepancy: 0.3016

The information below is about IL_4LFB_052

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_08849.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

6O90|1|a|G|1270
6O90|1|a|U|1271
6O90|1|a|C|1272
6O90|1|a|G|1273
*
6O90|1|a|C|1292
6O90|1|a|A|1293
6O90|1|a|A|1294
6O90|1|a|A|1295
6O90|1|a|U|1296
6O90|1|a|C|1297

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain j

30S ribosomal protein S10

Chain n

30S ribosomal protein S14 type Z