IL_6OF6_370
3D structure
- PDB id
- 6OF6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CGCCUG*CUGGCG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OF6_370 not in the Motif Atlas
- Geometric match to IL_4EYA_005
- Geometric discrepancy: 0.3206
- The information below is about IL_4EYA_005
- Detailed Annotation
- Tandem non-canonical cWW pairs with near WC pairs
- Broad Annotation
- Tandem non-canonical cWW pairs with near WC pairs
- Motif group
- IL_82292.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
6OF6|1|YA|C|2105
6OF6|1|YA|G|2106
6OF6|1|YA|C|2107
6OF6|1|YA|C|2108
6OF6|1|YA|U|2109
6OF6|1|YA|G|2110
*
6OF6|1|YA|C|2179
6OF6|1|YA|U|2180
6OF6|1|YA|G|2181
6OF6|1|YA|G|2182
6OF6|1|YA|C|2183
6OF6|1|YA|G|2184
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain XW
- Transfer RNA; tRNA
Coloring options: