IL_6OGG_199
3D structure
- PDB id
- 6OGG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GGGAG*UC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OGG_199 not in the Motif Atlas
- Homologous match to IL_5J7L_036
- Geometric discrepancy: 0.4813
- The information below is about IL_5J7L_036
- Detailed Annotation
- Left turn
- Broad Annotation
- Left turn
- Motif group
- IL_29346.2
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
6OGG|1|3|G|774
6OGG|1|3|G|775
6OGG|1|3|G|776
6OGG|1|3|A|777
6OGG|1|3|G|778
*
6OGG|1|3|U|804
6OGG|1|3|C|805
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain P
- 30S ribosomal protein S11
- Chain Z
- 30S ribosomal protein S21
- Chain b
- 50S ribosomal protein L2
Coloring options: