IL_6OGI_193
3D structure
- PDB id
- 6OGI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGGGGC*GCCUU
- Length
- 11 nucleotides
- Bulged bases
- 6OGI|1|3|G|926
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OGI_193 not in the Motif Atlas
- Geometric match to IL_7VYX_004
- Geometric discrepancy: 0.2978
- The information below is about IL_7VYX_004
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
6OGI|1|3|G|925
6OGI|1|3|G|926
6OGI|1|3|G|927
6OGI|1|3|G|928
6OGI|1|3|G|929
6OGI|1|3|C|930
*
6OGI|1|3|G|1387
6OGI|1|3|C|1388
6OGI|1|3|C|1389
6OGI|1|3|U|1390
6OGI|1|3|U|1391
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 4
- mRNA
- Chain J
- 30S ribosomal protein S5
- Chain Z
- 30S ribosomal protein S21
Coloring options: