IL_6OLE_043
3D structure
- PDB id
- 6OLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UC(E3C)A*UCCG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: E3C
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLE_043 not in the Motif Atlas
- Geometric match to IL_7LO9_004
- Geometric discrepancy: 0.2227
- The information below is about IL_7LO9_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36940.4
- Basepair signature
- cWW-tSH-tWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6OLE|1|S2|U|566
6OLE|1|S2|C|567
6OLE|1|S2|E3C|568
6OLE|1|S2|A|569
*
6OLE|1|S2|U|581
6OLE|1|S2|C|582
6OLE|1|S2|C|583
6OLE|1|S2|G|584
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SJ
- 40S ribosomal protein S9
- Chain SY
- 40S ribosomal protein S24
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