IL_6OLE_287
3D structure
- PDB id
- 6OLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGCU*GAUCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLE_287 not in the Motif Atlas
- Homologous match to IL_8C3A_111
- Geometric discrepancy: 0.1358
- The information below is about IL_8C3A_111
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50458.1
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6OLE|1|t|G|4362
6OLE|1|t|G|4363
6OLE|1|t|C|4364
6OLE|1|t|U|4365
*
6OLE|1|t|G|4402
6OLE|1|t|A|4403
6OLE|1|t|U|4404
6OLE|1|t|C|4405
6OLE|1|t|C|4406
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain K
- 60S ribosomal protein L10
- Chain c
- 60S ribosomal protein L29
Coloring options: