IL_6OLF_142
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGAUC*GGGCAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLF_142 not in the Motif Atlas
- Geometric match to IL_4V9F_018
- Geometric discrepancy: 0.291
- The information below is about IL_4V9F_018
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_67427.1
- Basepair signature
- cWW-cWW-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OLF|1|t|G|1408
6OLF|1|t|G|1409
6OLF|1|t|A|1410
6OLF|1|t|U|1411
6OLF|1|t|C|1412
*
6OLF|1|t|G|1437
6OLF|1|t|G|1438
6OLF|1|t|G|1439
6OLF|1|t|C|1440
6OLF|1|t|A|1441
6OLF|1|t|C|1442
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain R
- 60S ribosomal protein L18
- Chain c
- 60S ribosomal protein L29
Coloring options: