IL_6OLF_173
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGC*GGUG
- Length
- 7 nucleotides
- Bulged bases
- 6OLF|1|t|G|2322
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLF_173 not in the Motif Atlas
- Homologous match to IL_8C3A_061
- Geometric discrepancy: 0.2684
- The information below is about IL_8C3A_061
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73554.3
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 10
Unit IDs
6OLF|1|t|C|2269
6OLF|1|t|G|2270
6OLF|1|t|C|2271
*
6OLF|1|t|G|2321
6OLF|1|t|G|2322
6OLF|1|t|U|2323
6OLF|1|t|G|2324
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain D
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain b
- 60S ribosomal protein L27a
- Chain f
- 60S ribosomal protein L32
- Chain r
- 60S ribosomal protein L28
Coloring options: