IL_6OLF_203
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UCAAAGU*AAUGAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLF_203 not in the Motif Atlas
- Homologous match to IL_5TBW_088
- Geometric discrepancy: 0.2107
- The information below is about IL_5TBW_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36973.8
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
6OLF|1|t|U|3686
6OLF|1|t|C|3687
6OLF|1|t|A|3688
6OLF|1|t|A|3689
6OLF|1|t|A|3690
6OLF|1|t|G|3691
6OLF|1|t|U|3692
*
6OLF|1|t|A|3703
6OLF|1|t|A|3704
6OLF|1|t|U|3705
6OLF|1|t|G|3706
6OLF|1|t|A|3707
6OLF|1|t|A|3708
6OLF|1|t|G|3709
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain j
- 60S ribosomal protein L36
- Chain p
- 60S ribosomal protein L36a
- Chain v
- Transfer RNA; tRNA
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