IL_6OLF_215
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UUG*CA
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLF_215 not in the Motif Atlas
- Geometric match to IL_5J7L_269
- Geometric discrepancy: 0.1743
- The information below is about IL_5J7L_269
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_26793.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 16
Unit IDs
6OLF|1|t|U|4257
6OLF|1|t|U|4258
6OLF|1|t|G|4259
*
6OLF|1|t|C|4276
6OLF|1|t|A|4277
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain F
- 60S ribosomal protein L5
- Chain R
- 60S ribosomal protein L18
- Chain U
- 60S ribosomal protein L21
- Chain c
- 60S ribosomal protein L29
- Chain p
- 60S ribosomal protein L36a
Coloring options: