IL_6OLF_293
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUUAAG*CCAUAC
- Length
- 12 nucleotides
- Bulged bases
- 6OLF|1|t|U|2051
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLF_293 not in the Motif Atlas
- Geometric match to IL_8VTW_106
- Geometric discrepancy: 0.2726
- The information below is about IL_8VTW_106
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49767.7
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
6OLF|1|t|G|1885
6OLF|1|t|U|1886
6OLF|1|t|U|1887
6OLF|1|t|A|1888
6OLF|1|t|A|1889
6OLF|1|t|G|1890
*
6OLF|1|t|C|2048
6OLF|1|t|C|2049
6OLF|1|t|A|2050
6OLF|1|t|U|2051
6OLF|1|t|A|2052
6OLF|1|t|C|2053
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain E
- 5S ribosomal RNA; 5S rRNA
- Chain H
- 60S ribosomal protein L7
- Chain R
- 60S ribosomal protein L18
- Chain f
- 60S ribosomal protein L32
- Chain g
- 60S ribosomal protein L35a
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