#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6break 7 8 9 10 111-112-103-95-86-7
1 IL_5J7L_3505J7L0.14071UAA/GAN with extra cWWDA LSU rRNAG2737A2738U2739A2740A2741G2742*C2762G2763A2764A2766C2767cWWcwWtWHtHS
2 IL_7A0S_0987A0S0.07991UAA/GAN with extra cWWX LSU rRNAG2717A2718U2719A2720A2721C2722*G2742G2743A2744G2746C2747cWWcWWtHScWW
3 IL_8VTW_1068VTW0.00001UAA/GAN with extra cWW (H)1A LSU rRNAG2737A2738U2739A2740A2741C2742*G2762G2763A2764G2766C2767cWWcWWtWHtHScWW
4 IL_4WF9_1044WF90.10191UAA/GAN with extra cWWX LSU rRNAG2764A2765U2766A2767A2768G2769*U2789G2790A2791G2793C2794cWWtWHtHScWW
5 IL_4V9F_0964V9F0.11731UAA/GAN with extra cWW0 LSU rRNAG2772G2773U2774A2775A2776G2777*C2797G2798A2799A2801C2802cWWtWHtHScWW
6 IL_7A0S_1087A0S0.42611X LSU rRNAU1592C1593U1594A1595A1596A1597*U1431G1432A1433G1435G1436cWWntWHcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAUAAC*GGAAGC2
GAUAAG*CGAAAC1
GAUAAG*UGAAGC1
GGUAAG*CGAAAC1
UCUAAA*UGAUGG1
Non-Watson-Crick part of the motif
SequenceCounts
AUAA*GAAG3
AUAA*GAAA1
GUAA*GAAA1
CUAA*GAUG1

Release history

Release3.883.89
Date2024-09-112024-10-09
StatusUpdated, 1 parentExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • UAA/GAN with extra cWW (4)
  • (1)
  • UAA/GAN with extra cWW (H) (1)
  • Basepair signature
    cWW-cWW-tWH-L-tHS-cWW
    Heat map statistics
    Min 0.08 | Avg 0.19 | Max 0.46
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