IL_6OLF_311
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUGAAUUU*AUUAGUCAG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLF_311 not in the Motif Atlas
- Homologous match to IL_8CRE_005
- Geometric discrepancy: 0.1943
- The information below is about IL_8CRE_005
- Detailed Annotation
- tSH-tHW-tHH-tHS
- Broad Annotation
- tSH-tHW-tHH-tHS
- Motif group
- IL_84694.2
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
6OLF|1|t|C|30
6OLF|1|t|U|31
6OLF|1|t|G|32
6OLF|1|t|A|33
6OLF|1|t|A|34
6OLF|1|t|U|35
6OLF|1|t|U|36
6OLF|1|t|U|37
*
6OLF|1|t|A|44
6OLF|1|t|U|45
6OLF|1|t|U|46
6OLF|1|t|A|47
6OLF|1|t|G|48
6OLF|1|t|U|49
6OLF|1|t|C|50
6OLF|1|t|A|51
6OLF|1|t|G|52
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain M
- 60S ribosomal protein L13
- Chain O
- 60S ribosomal protein L15
- Chain b
- 60S ribosomal protein L27a
- Chain k
- 60S ribosomal protein L37
- Chain p
- 60S ribosomal protein L36a
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