IL_6OLF_312
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGGAGG*UUCCAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLF_312 not in the Motif Atlas
- Geometric match to IL_3IGI_015
- Geometric discrepancy: 0.3285
- The information below is about IL_3IGI_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82292.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
6OLF|1|t|C|454
6OLF|1|t|G|455
6OLF|1|t|G|456
6OLF|1|t|A|457
6OLF|1|t|G|458
6OLF|1|t|G|459
*
6OLF|1|t|U|683
6OLF|1|t|U|684
6OLF|1|t|C|685
6OLF|1|t|C|686
6OLF|1|t|A|687
6OLF|1|t|G|688
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain G
- 60S ribosomal protein L6
- Chain r
- 60S ribosomal protein L28
Coloring options: