IL_6OLG_081
3D structure
- PDB id
- 6OLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUCAUCAG*CUGGAG
- Length
- 14 nucleotides
- Bulged bases
- 6OLG|1|A2|U|1911, 6OLG|1|A2|C|1912, 6OLG|1|A2|G|2036, 6OLG|1|A2|A|2038
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLG_081 not in the Motif Atlas
- Homologous match to IL_8C3A_054
- Geometric discrepancy: 0.2545
- The information below is about IL_8C3A_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_27086.1
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6OLG|1|A2|C|1907
6OLG|1|A2|U|1908
6OLG|1|A2|C|1909
6OLG|1|A2|A|1910
6OLG|1|A2|U|1911
6OLG|1|A2|C|1912
6OLG|1|A2|A|1913
6OLG|1|A2|G|1914
*
6OLG|1|A2|C|2034
6OLG|1|A2|U|2035
6OLG|1|A2|G|2036
6OLG|1|A2|G|2037
6OLG|1|A2|A|2038
6OLG|1|A2|G|2039
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AH
- 60S ribosomal protein L9
- Chain AM
- 60S ribosomal protein L14
- Chain AO
- 60S ribosomal protein L13a
- Chain AS
- 60S ribosomal protein L18a
- Chain Am
- 60S ribosomal protein L40
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