IL_6OLG_112
3D structure
- PDB id
- 6OLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CGAAGG*UGUUGACG
- Length
- 14 nucleotides
- Bulged bases
- 6OLG|1|A2|A|3634, 6OLG|1|A2|U|3650, 6OLG|1|A2|C|3654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLG_112 not in the Motif Atlas
- Homologous match to IL_8C3A_088
- Geometric discrepancy: 0.1128
- The information below is about IL_8C3A_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_64509.1
- Basepair signature
- cWW-tWW-tWW-tSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OLG|1|A2|C|3631
6OLG|1|A2|G|3632
6OLG|1|A2|A|3633
6OLG|1|A2|A|3634
6OLG|1|A2|G|3635
6OLG|1|A2|G|3636
*
6OLG|1|A2|U|3648
6OLG|1|A2|G|3649
6OLG|1|A2|U|3650
6OLG|1|A2|U|3651
6OLG|1|A2|G|3652
6OLG|1|A2|A|3653
6OLG|1|A2|C|3654
6OLG|1|A2|G|3655
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AA
- 60S ribosomal protein L8
- Chain Ap
- 60S ribosomal protein L37a
- Chain B1
- Small subunit ribosomal RNA; SSU rRNA
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