IL_6OLG_128
3D structure
- PDB id
- 6OLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGAG*CGCCGGUGAAAUAC
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLG_128 not in the Motif Atlas
- Geometric match to IL_1MZP_003
- Geometric discrepancy: 0.2508
- The information below is about IL_1MZP_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75283.2
- Basepair signature
- cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R
- Number of instances in this motif group
- 3
Unit IDs
6OLG|1|A2|G|3941
6OLG|1|A2|G|3942
6OLG|1|A2|A|3943
6OLG|1|A2|G|3944
*
6OLG|1|A2|C|4008
6OLG|1|A2|G|4009
6OLG|1|A2|C|4010
6OLG|1|A2|C|4011
6OLG|1|A2|G|4012
6OLG|1|A2|G|4013
6OLG|1|A2|U|4014
6OLG|1|A2|G|4015
6OLG|1|A2|A|4016
6OLG|1|A2|A|4017
6OLG|1|A2|A|4018
6OLG|1|A2|U|4019
6OLG|1|A2|A|4020
6OLG|1|A2|C|4021
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain Au
- 60S ribosomal protein L10a
Coloring options: