IL_6OLZ_005
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUCAGUAA*UGAACAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLZ_005 not in the Motif Atlas
- Homologous match to IL_5TBW_006
- Geometric discrepancy: 0.1422
- The information below is about IL_5TBW_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_88613.1
- Basepair signature
- cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OLZ|1|A2|C|81
6OLZ|1|A2|U|82
6OLZ|1|A2|C|83
6OLZ|1|A2|A|84
6OLZ|1|A2|G|85
6OLZ|1|A2|U|86
6OLZ|1|A2|A|87
6OLZ|1|A2|A|88
*
6OLZ|1|A2|U|96
6OLZ|1|A2|G|97
6OLZ|1|A2|A|98
6OLZ|1|A2|A|99
6OLZ|1|A2|C|100
6OLZ|1|A2|A|101
6OLZ|1|A2|G|102
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AL
- 60S ribosomal protein L13
- Chain AN
- 60S ribosomal protein L15
- Chain AQ
- 60S ribosomal protein L18
- Chain Aa
- 60S ribosomal protein L27a
- Chain Ao
- 60S ribosomal protein L36a
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