IL_6OLZ_080
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGCCCGAU*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLZ_080 not in the Motif Atlas
- Homologous match to IL_8C3A_052
- Geometric discrepancy: 0.3197
- The information below is about IL_8C3A_052
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_84902.1
- Basepair signature
- cWW-L-cWW-L-L-R-cHH
- Number of instances in this motif group
- 2
Unit IDs
6OLZ|1|A2|C|1892
6OLZ|1|A2|G|1893
6OLZ|1|A2|C|1894
6OLZ|1|A2|C|1895
6OLZ|1|A2|C|1896
6OLZ|1|A2|G|1897
6OLZ|1|A2|A|1898
6OLZ|1|A2|U|1899
*
6OLZ|1|A2|G|2045
6OLZ|1|A2|G|2046
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AF
- 60S ribosomal protein L7
- Chain AO
- 60S ribosomal protein L13a
- Chain AS
- 60S ribosomal protein L18a
- Chain Af
- 60S ribosomal protein L35a
Coloring options: