IL_6OLZ_092

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUAGUAG*CGAAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_092 not in the Motif Atlas

Homologous match to IL_8C3A_065

Geometric discrepancy: 0.1545

The information below is about IL_8C3A_065

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76042.3

Basepair signature

cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

9

Unit IDs

6OLZ|1|A2|G|2337
6OLZ|1|A2|U|2338
6OLZ|1|A2|A|2339
6OLZ|1|A2|G|2340
6OLZ|1|A2|U|2341
6OLZ|1|A2|A|2342
6OLZ|1|A2|G|2343
*
6OLZ|1|A2|C|3829
6OLZ|1|A2|G|3830
6OLZ|1|A2|A|3831
6OLZ|1|A2|A|3832
6OLZ|1|A2|A|3833
6OLZ|1|A2|C|3834

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AC

60S ribosomal protein L4

Chain AP

60S ribosomal protein L17