IL_6OLZ_202
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUUC
- Length
- 16 nucleotides
- Bulged bases
- 6OLZ|1|B1|A|628, 6OLZ|1|B1|U|630
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLZ_202 not in the Motif Atlas
- Homologous match to IL_4V88_415
- Geometric discrepancy: 0.1807
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
6OLZ|1|B1|G|611
6OLZ|1|B1|U|612
6OLZ|1|B1|G|613
6OLZ|1|B1|C|614
6OLZ|1|B1|C|615
6OLZ|1|B1|A|616
6OLZ|1|B1|G|617
*
6OLZ|1|B1|C|624
6OLZ|1|B1|G|625
6OLZ|1|B1|G|626
6OLZ|1|B1|U|627
6OLZ|1|B1|A|628
6OLZ|1|B1|A|629
6OLZ|1|B1|U|630
6OLZ|1|B1|U|631
6OLZ|1|B1|C|632
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BD
- 40S ribosomal protein S3
- Chain BX
- 40S ribosomal protein S23
- Chain Be
- 40S ribosomal protein S30
- Chain Bx
- mRNA
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