IL_6OLZ_291

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

6OLZ|1|A2|A|4016

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_291 not in the Motif Atlas

Geometric match to IL_1MZP_003

Geometric discrepancy: 0.3989

The information below is about IL_1MZP_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75283.2

Basepair signature

cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R

Number of instances in this motif group

3

Unit IDs

6OLZ|1|A2|G|3941
6OLZ|1|A2|G|3942
6OLZ|1|A2|A|3943
6OLZ|1|A2|G|3944
*
6OLZ|1|A2|C|4008
6OLZ|1|A2|G|4009
6OLZ|1|A2|C|4010
6OLZ|1|A2|C|4011
6OLZ|1|A2|G|4012
6OLZ|1|A2|G|4013
6OLZ|1|A2|U|4014
6OLZ|1|A2|G|4015
6OLZ|1|A2|A|4016
6OLZ|1|A2|A|4017
6OLZ|1|A2|A|4018
6OLZ|1|A2|U|4019
6OLZ|1|A2|A|4020
6OLZ|1|A2|C|4021

Current chains

Chain A2

28S ribosomal RNA

Nearby chains