IL_6OM0_153
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 6OM0|1|t|G|1607, 6OM0|1|t|A|1619, 6OM0|1|t|A|1620
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM0_153 not in the Motif Atlas
- Geometric match to IL_5TBW_033
- Geometric discrepancy: 0.1009
- The information below is about IL_5TBW_033
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6OM0|1|t|G|1606
6OM0|1|t|G|1607
6OM0|1|t|G|1608
*
6OM0|1|t|U|1618
6OM0|1|t|A|1619
6OM0|1|t|A|1620
6OM0|1|t|U|1621
6OM0|1|t|C|1622
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain O
- 60S ribosomal protein L15
- Chain Q
- 60S ribosomal protein L17
- Chain k
- 60S ribosomal protein L37
- Chain y
- Proprotein convertase subtilisin/kexin type 9
Coloring options: