IL_6OM0_172
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUCAUCAG*CUGGAG
- Length
- 14 nucleotides
- Bulged bases
- 6OM0|1|t|U|1911, 6OM0|1|t|C|1912, 6OM0|1|t|G|2036, 6OM0|1|t|A|2038
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM0_172 not in the Motif Atlas
- Geometric match to IL_5TBW_051
- Geometric discrepancy: 0.2485
- The information below is about IL_5TBW_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_27086.1
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6OM0|1|t|C|1907
6OM0|1|t|U|1908
6OM0|1|t|C|1909
6OM0|1|t|A|1910
6OM0|1|t|U|1911
6OM0|1|t|C|1912
6OM0|1|t|A|1913
6OM0|1|t|G|1914
*
6OM0|1|t|C|2034
6OM0|1|t|U|2035
6OM0|1|t|G|2036
6OM0|1|t|G|2037
6OM0|1|t|A|2038
6OM0|1|t|G|2039
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain J
- 60S ribosomal protein L9
- Chain N
- 60S ribosomal protein L14
- Chain P
- 60S ribosomal protein L13a
- Chain T
- 60S ribosomal protein L18a
- Chain n
- 60S ribosomal protein L40
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