IL_6OM0_188
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAUC*GGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM0_188 not in the Motif Atlas
- Homologous match to IL_5TBW_067
- Geometric discrepancy: 0.2181
- The information below is about IL_5TBW_067
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_95716.2
- Basepair signature
- cWW-cWW-tHS-tHS-tSH-cWW
- Number of instances in this motif group
- 18
Unit IDs
6OM0|1|t|C|2568
6OM0|1|t|G|2569
6OM0|1|t|A|2570
6OM0|1|t|U|2571
6OM0|1|t|C|2572
*
6OM0|1|t|G|2731
6OM0|1|t|G|2732
6OM0|1|t|G|2733
6OM0|1|t|A|2734
6OM0|1|t|G|2735
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain a
- 60S ribosomal protein L27
- Chain h
- 60S ribosomal protein L34
Coloring options: