IL_6OM0_219
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUGA*UACA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM0_219 not in the Motif Atlas
- Homologous match to IL_5TBW_100
- Geometric discrepancy: 0.2766
- The information below is about IL_5TBW_100
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
6OM0|1|t|U|4257
6OM0|1|t|U|4258
6OM0|1|t|G|4259
6OM0|1|t|A|4260
*
6OM0|1|t|U|4274
6OM0|1|t|A|4275
6OM0|1|t|C|4276
6OM0|1|t|A|4277
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain F
- 60S ribosomal protein L5
- Chain R
- 60S ribosomal protein L18
- Chain U
- 60S ribosomal protein L21
- Chain c
- 60S ribosomal protein L29
- Chain p
- 60S ribosomal protein L36a
Coloring options: