IL_6OM6_090
3D structure
- PDB id
- 6OM6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUUGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 6OM6|1|1|U|2132
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM6_090 not in the Motif Atlas
- Homologous match to IL_3U4M_004
- Geometric discrepancy: 0.2996
- The information below is about IL_3U4M_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90775.1
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 23
Unit IDs
6OM6|1|1|C|2129
6OM6|1|1|U|2130
6OM6|1|1|U|2131
6OM6|1|1|U|2132
6OM6|1|1|G|2133
6OM6|1|1|A|2134
6OM6|1|1|A|2135
6OM6|1|1|G|2136
*
6OM6|1|1|U|2155
6OM6|1|1|G|2156
6OM6|1|1|G|2157
6OM6|1|1|A|2158
6OM6|1|1|G|2159
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: