IL_6OM7_095
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGAUG*CUAUC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM7_095 not in the Motif Atlas
- Geometric match to IL_5TBW_121
- Geometric discrepancy: 0.2791
- The information below is about IL_5TBW_121
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
6OM7|1|S2|G|1722
6OM7|1|S2|G|1723
6OM7|1|S2|A|1724
6OM7|1|S2|U|1725
6OM7|1|S2|G|1726
*
6OM7|1|S2|C|1807
6OM7|1|S2|U|1808
6OM7|1|S2|A|1809
6OM7|1|S2|U|1810
6OM7|1|S2|C|1811
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SX
- 40S ribosomal protein S23
- Chain W
- 60S ribosomal protein L23
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
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