IL_6OM7_155
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUCGCCCACG*CG
- Length
- 12 nucleotides
- Bulged bases
- 6OM7|1|t|C|1680, 6OM7|1|t|C|1699, 6OM7|1|t|C|1700, 6OM7|1|t|A|1701
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM7_155 not in the Motif Atlas
- Homologous match to IL_5TBW_036
- Geometric discrepancy: 0.5746
- The information below is about IL_5TBW_036
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_42230.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6OM7|1|t|C|1676
6OM7|1|t|U|1677
6OM7|1|t|C|1678
6OM7|1|t|G|1679
6OM7|1|t|C|1680
6OM7|1|t|C|1699
6OM7|1|t|C|1700
6OM7|1|t|A|1701
6OM7|1|t|C|1702
6OM7|1|t|G|1703
*
6OM7|1|t|C|1822
6OM7|1|t|G|1823
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain H
- 60S ribosomal protein L7
- Chain R
- 60S ribosomal protein L18
- Chain U
- 60S ribosomal protein L21
- Chain c
- 60S ribosomal protein L29
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