IL_6OM7_159
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCGAAU*AAAC
- Length
- 10 nucleotides
- Bulged bases
- 6OM7|1|t|G|1723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM7_159 not in the Motif Atlas
- Homologous match to IL_8C3A_043
- Geometric discrepancy: 0.1454
- The information below is about IL_8C3A_043
- Detailed Annotation
- C-loop with bulged stacked A's
- Broad Annotation
- C-loop
- Motif group
- IL_02509.3
- Basepair signature
- cWW-cWS-cWW-cWW-R-cSH-tWH-R
- Number of instances in this motif group
- 6
Unit IDs
6OM7|1|t|G|1721
6OM7|1|t|C|1722
6OM7|1|t|G|1723
6OM7|1|t|A|1724
6OM7|1|t|A|1725
6OM7|1|t|U|1726
*
6OM7|1|t|A|1768
6OM7|1|t|A|1769
6OM7|1|t|A|1770
6OM7|1|t|C|1771
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain E
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 60S ribosomal protein L5
- Chain K
- 60S ribosomal protein L10
- Chain U
- 60S ribosomal protein L21
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