IL_6OM7_253
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCGU*ACC
- Length
- 7 nucleotides
- Bulged bases
- 6OM7|1|D|C|150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM7_253 not in the Motif Atlas
- Geometric match to IL_8C3A_468
- Geometric discrepancy: 0.2438
- The information below is about IL_8C3A_468
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_10289.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 237
Unit IDs
6OM7|1|D|G|149
6OM7|1|D|C|150
6OM7|1|D|G|151
6OM7|1|D|U|152
*
6OM7|1|t|A|5
6OM7|1|t|C|6
6OM7|1|t|C|7
Current chains
- Chain D
- 5.8S ribosomal RNA
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain I
- 60S ribosomal protein L7a
- Chain O
- 60S ribosomal protein L15
- Chain Y
- 60S ribosomal protein L23a
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